Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819750.1_cds_XP_016500155.1_14009
CDS Infomation

[gene=LOC107818627] [db_xref=GeneID:107818627] [protein=ABC transporter C family member 3-like] [partial=5'] [protein_id=XP_016500155.1] [location=complement(join(8425..8549,8631..9126,9264..9428,9574..10206,10288..10374,10457..>10570))] [gbkey=CDS]
Sequence

GGACAGAAGCAGAGAATACAGATTGCTCGTGCTCTTTACCAAGATGCTGATGTTTACCTG
TTTGATGATCCGTTCAGTGCTGTGGATGCTCATACCGGATCCCATCTCTTCAATGAATGT
ATAATGGGGCTATTGAATTCAAAAACAGTTTTATATGTTACACATCAAGTGGAGTTTTTG
CCTGCTGCGGATTTGATCTTGGTCATGAAAGATGGAAGGATCAGTGAAGCTGGGAAATAC
AATGATCTTCTCAAATTAGGTAGTGACTTCATGGAACTTGTGGGTGCTCACCAAGAAGCT
TTAACAGCAATTGACACAGTTAAGGGAGAAGCATTGAGAAAGAGTGAGGAAATGACTGGT
GATAATACAAATGTACAGAAGGATAAAAATATTTCAGATGGCCAAAATGGTAAAGTGGAT
GATATTGTTGGAACAAAGGGACAAATTGTTCAGGAGGAGGAAAGAGAGAAAGGTAGTGTT
GGTTTTTCAGTTTACTGGAAATATATAACAACTGCATATGGAGGTGCTCTTGTGCCATTT
ATGCTGTTGGCACAAGTTGGTTTTCAGCTCCTTCAAATTGGAAGCAATTATTGGATGGCG
TGGGCAACTCCCGTCTCAAAGAGTGAGCCACCTCCTGTTGGGAGTTCTACTCTCATCATT
GTCTATGTTGCTTTAGGAATTGCAAGTGCTTTATGCATCCTTGCTAGAACCATGCTTCTT
GTTACCGCTGGATATAAGACAGCCTCTTTGCTTTTCCATAAAATGCATCTTTGCATTTTC
CGTGCTCCAATGTCCTTCTTCGATGCCACACCGAGTGGGCGGATTCTAAACAGAGCATCG
ACAGATCAAAGTGCAGTTGATCTGAATGTTCCCTTTCAAGTTGGATCCTTTGCCTTCACA
ATAATACAGCTTTTAGGAATTATTGGAGTAATGTCACAAGTTGCATGGCAGGTCTTCATT
GTCTTTATTCCGGTCATTGCAGTTTGCATCTGGTTGGAGCAATATTACATACCATCAGCA
CGAGAACTGGCACGGCTAAATGGGACATGCAAAGCTCCAGTAATACAGCACTTTGCCGAG
ACAATTTCAGGATCAAGCACAATTAGAAGTTTCGATCAGGAATCTAGATTCCAGGACACA
AGTATGAAATTGATAGACAATTATTCTCGGCCTAAGTTTCACATCGCTGCTGCAATGGAG
TGGCTTTGTATGCGTTTGGATATGTTATCTCTGATCACTTTTGCTTTCTCTTTGATTTTC
TTGATCTCTCTCCCTGTTGGAACAATTGACCCAAGTAAGTTCTCTATCTTCATGTTTTCT
TTCCTTGAAGTTTGTTGTGTCNTCCTTGACGAGGCTACAGCATCTGTCGACACTGCAACT
GATAATCTTATTCAGCAAACTCTAAGGCTGCACTTCTCTGATTCCACGGTTATAACCATT
GCTCATAGGATTACATCTGTGCTTGACAGTGATATGGTCCTACTATTAGATCACGGGCTC
ATTGCTGAATACGACACTCCAGCCAGGTTGTTAGAGAACGAATCCTCATTGTTTGCTAAG
CTCGTGGCAGAGTATAGTATGAGGTCAAATTCAAGTTTTGAGAATGTTTCAGACATGTGA

Peptide Sequence

PEP ID

XP_016500155.1
PEP Infomation

PREDICTED: ABC transporter C family member 3-like, partial [Nicotiana tabacum]
Sequence

GQKQRIQIARALYQDADVYLFDDPFSAVDAHTGSHLFNECIMGLLNSKTVLYVTHQVEFL
PAADLILVMKDGRISEAGKYNDLLKLGSDFMELVGAHQEALTAIDTVKGEALRKSEEMTG
DNTNVQKDKNISDGQNGKVDDIVGTKGQIVQEEEREKGSVGFSVYWKYITTAYGGALVPF
MLLAQVGFQLLQIGSNYWMAWATPVSKSEPPPVGSSTLIIVYVALGIASALCILARTMLL
VTAGYKTASLLFHKMHLCIFRAPMSFFDATPSGRILNRASTDQSAVDLNVPFQVGSFAFT
IIQLLGIIGVMSQVAWQVFIVFIPVIAVCIWLEQYYIPSARELARLNGTCKAPVIQHFAE
TISGSSTIRSFDQESRFQDTSMKLIDNYSRPKFHIAAAMEWLCMRLDMLSLITFAFSLIF
LISLPVGTIDPSKFSIFMFSFLEVCCVXLDEATASVDTATDNLIQQTLRLHFSDSTVITI
AHRITSVLDSDMVLLLDHGLIAEYDTPARLLENESSLFAKLVAEYSMRSNSSFENVSDM

Transcript Sequence

Gene sequence data has not been registered.